Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015837106.1_cds_XP_016506542.1_19758
CDS Infomation

[gene=LOC107824308] [db_xref=GeneID:107824308] [protein=translocase of chloroplast 90, chloroplastic-like] [protein_id=XP_016506542.1] [location=complement(join(57330..59593,62642..62768))] [gbkey=CDS]
Sequence

ATGATGAGTTTGAAGGACTGGGTCCTATCACAGTTGATATCCAAGTCAGTAGCCTCATCG
AGACCACTTTTAGCATCAGATAGCTTTTTATCAGAGGAACATCCTGATCAAGAGTTTGAT
CGCCCAGCTCACACTGCTGATTTGGTTACAACAACGGCATTAGCCAATACAACCCAATCT
TCCAATGATAATCAGCAGAATACAAATCATTTCCATTCACAGCAACGGATGGCGGAGGAT
TCTTTTCAGTCAGATTTTAGTGTCAGTGAGAAGCCTAGTCCAGTGGTAAAGATTGAAGCC
CTTCAGATTAAGTTCTTGCGGCTTCTTAAACGTTTTGGCCTGTCCGAGGACAACCTTCTG
GTATCAAAGGTCTTATACCGAATCCAGCTGGCATCACTGATACGGGCAAGAGAATCAGAT
TTAAAAAGGGCAAATCTTAAAATTGAGAGAGCACGTGTAATGGCAGCAGAACAAGAAGCT
GCTGGCCGACCGCAATTGGATTTCTCATTTAAGATCCTTGTACTGGGTAGAACTGGAGTT
GGCAAGAGTTCAACCATAAATTCCATATTTGACCAATCAAGAGCAACAACCAACGCGTTC
AAGCCTGCTACTGACCGTATTCAAGAGATCGATGGAACAGTAAATGGCATCAGAGTATCG
TTTATTGACACTCCTGGTTTATTGCCTCCCTCACCCAGTAATGTCAGGAAAAACAAGAAG
ATTTTGCGTTCTGTGAAACGATTTTTAAGGAAATCTAAACCGGACATGGTACTGTATTTT
GAGCGCCTGGATTTGATCAACACAGGCTACAGTGATTTCCCCTTGTTGAAGCTTATAACG
GAAGTCTTTGGTCCTGCAATTTGGTTTAATACCATCATTGTCATGACTCATTCTTCCTTC
ATTCTTCCCGAAGGGATAAATGGATATCCTGTTAACTATGAATCTTTCGTCACCACCTGC
ACAGATTTGGTGCAACATTATATTCACCAGGCAGTCTCTGACACAAAGCTTGAAAATCCT
GTAGTTTTAGTGGAGAATGATCCCAATTGCAAAACCAATAATGCCGGAGAGAAAATTCTA
CCTAATGGGCTGGCGTGGAAGTCTCAGTTATTGTTGCTGTGCATATGCACCAAAGTTCTA
AGTGATGTTAATACCCTGTTGGACTTTGAAGACAGCCTAAAGGTGGGACCATCGAATGTC
GGACGATTGCCTTCTCTTCCACATCTTCTCTCGTCCTTTCTAAAGCATCATGCTCAGATA
AGGCACGGTGGATCTGAGAATGAAATTGATGAGGTTCCTCTTTTAGACTCGGATGATGAA
GATGAATATGATCAATTACCTCCTATTCGGATACTGACCAAGTCTCAGTTTGAAAGGTTG
AGTGGTTCTCAGAAGAAGGATTATCTTGACGAATTAGACTACCGGGAAACACTCTATTTG
AAAAAACAACTGATAGAAGAAGCTCGTAGGCGAAGAGAAAAGAGAGTTTCTTCGAGTGAG
AGTAAAGCCCCAAATGATGAGTCTGATAACCAGGAGGAGGGCTCTCCAGAGCCGGTTCTG
TTGCCAGATATGGCTATTCCGCCAAGCTTCGATTCAGATTGCCCTGTCCACAGATACAGG
TGTCTCGTTACCAGCGAACAGTGGCTTGCACGACCAGTGCTTGATACCAATGGATGGGAC
CATGATGTGAGTTTTGATGGCATTAACCTGGAGAGCAGTGCAGAAATAAGAAAAAACGTC
ATTGCCTCAGTCAATGGACAAATGAGCAAGGACAAACGAGACTTCAGTATTCAATCCGAG
TTTGCTGCAGCATTCACCAATCCAGGTGGGCCCACTTATGCGGTAGGTCTTGATATTCAA
TCTGCCAACAAGGAGCTGATCTGCACTATTCACAGTAGTGCAAAGGTAAGAAACTTAAGA
AATAATGTCACTGAATGCGGTATTTCTGTAATACCATTCGGGGATAAGTATTTTCTAGGT
ACCAAGTGTGAAGATAGTTTTTCAATTGGAAAGAGACTGAAGTTTACTGTGAATGCTGGT
CGGATGGGGGTTGCTGGGCAAGCGGCTTATGGCGGAAACTTTGGAGCTACTTTAAGAGGA
AAAGATTACCCAGTGAGAAATGAAAGTCTCAGTCTCTCGATGACAGTTCTCTCTCTTAAC
AAAGATACAGTGCTGAGTGGGAACTTGCAAACTGACTTCAGAGTGAGCCGAGGTACAAAC
ATGTCAGTAAGCGCAAACCTCAATAACCGGAAGATGGGTCAGGTTTCCATCAAGACAAGC
AGCTCTGAGCACATGGAAGTAGCTTTTATTGCACTTTTCTCGATCGTCAGGGCCTTATTT
CGCAGAAAGAGAACTGACCAACTTGTTGGAGACTCCCTGGAAGCGGGATGA

Peptide Sequence

PEP ID

XP_016506542.1
PEP Infomation

PREDICTED: translocase of chloroplast 90, chloroplastic-like [Nicotiana tabacum]
Sequence

MMSLKDWVLSQLISKSVASSRPLLASDSFLSEEHPDQEFDRPAHTADLVTTTALANTTQS
SNDNQQNTNHFHSQQRMAEDSFQSDFSVSEKPSPVVKIEALQIKFLRLLKRFGLSEDNLL
VSKVLYRIQLASLIRARESDLKRANLKIERARVMAAEQEAAGRPQLDFSFKILVLGRTGV
GKSSTINSIFDQSRATTNAFKPATDRIQEIDGTVNGIRVSFIDTPGLLPPSPSNVRKNKK
ILRSVKRFLRKSKPDMVLYFERLDLINTGYSDFPLLKLITEVFGPAIWFNTIIVMTHSSF
ILPEGINGYPVNYESFVTTCTDLVQHYIHQAVSDTKLENPVVLVENDPNCKTNNAGEKIL
PNGLAWKSQLLLLCICTKVLSDVNTLLDFEDSLKVGPSNVGRLPSLPHLLSSFLKHHAQI
RHGGSENEIDEVPLLDSDDEDEYDQLPPIRILTKSQFERLSGSQKKDYLDELDYRETLYL
KKQLIEEARRRREKRVSSSESKAPNDESDNQEEGSPEPVLLPDMAIPPSFDSDCPVHRYR
CLVTSEQWLARPVLDTNGWDHDVSFDGINLESSAEIRKNVIASVNGQMSKDKRDFSIQSE
FAAAFTNPGGPTYAVGLDIQSANKELICTIHSSAKVRNLRNNVTECGISVIPFGDKYFLG
TKCEDSFSIGKRLKFTVNAGRMGVAGQAAYGGNFGATLRGKDYPVRNESLSLSMTVLSLN
KDTVLSGNLQTDFRVSRGTNMSVSANLNNRKMGQVSIKTSSSEHMEVAFIALFSIVRALF
RRKRTDQLVGDSLEAG

Transcript Sequence

Gene sequence data has not been registered.